Summary and Schedule
This is the format of the workshop on OMOP and R that will take place at the UCL Festival of Digital Innovation on July 15th 2025.
It is the initial work on a full Carpentries Course that we will begin to roll out from September.
Prerequisite
A laptop running R and RStudio
Setup Instructions | Download files required for the lesson | |
Duration: 00h 00m | 1. What is OMOP? |
What is OMOP? What information would you expect to find in the person table? What information would you expect to find in the condition_occurrence table? How can you join these tables to aggregate information? |
Duration: 00h 00m | Finish |
The actual schedule may vary slightly depending on the topics and exercises chosen by the instructor.
This lesson assumes you have current versions of the following installed on your computer:
- the R software itself, and
- RStudio Desktop.
You also need to download some files to follow this lesson:
- Make a new folder in your Desktop called
omop_taster
. - Download omop-data.zip and move the file to this folder.
- If it’s not unzipped yet, unzip it. There should now be a folder
called
data
in theomop_taster
folder. - You can access this folder from the Unix shell with: